October 9, 2015
Since I posted my preprint “Almost all known sauropod necks are incomplete and distorted” and asked in the comments for people to let me know if I missed any good necks, the candidates have been absolutely rolling in:
- The Kaatedocus siberi holotype SMA 0004 (thanks to Oliver Demuth for pointing this out)
- The Futalognkosaurus dukei holotype MUCPv-323 (thanks to Matt Lamanna)
- The referred Rapetosaurus specimen FMNH PR 2209 (Matt Lamanna again)
- The as-yet unnnamed DGM ‘Series A’ titanosaur from Peirópolis (Matt Lamanna again)
- The Camarasaurus lewisi holotype BYU 9047 (thanks to John D’Angelo)
- Dicraeosaurus hansemanni — the mounted “m” specimen, probably MB.R.4886 (thanks to Emanuel Tschopp)
- Maybe some Omeisaurus specimens (Emanuel Tschopp again)
I will be investigating the completeness of all of these and mentioning them as appropriate when I submit the revision of this paper. (In retrospect, I should have waited a week after posting the preprint before submitting for formal review; but I was so scared of letting it brew for years, as we’re still doing with the Barosaurus preprint to our shame, that I submitted it immediately.)
So we probably have a larger number of complete or near-complete sauropod necks than the current draft of this paper suggests. But still very few in the scheme of things, and essentially none that aren’t distorted.
So I want to consider why we have such a poor fossil record of sauropod necks. All of the problems with sauropod neck preservation arise from the nature of the animals.
First, sauropods are big. This is a recipe for incompleteness of preservation. (It’s no accident that the most completely preserved specimens are of small individuals such as CM 11338, the cow-sized juvenile Camarasaurus lentus described by Gilmore, 1925). For an organism to be fossilised, the carcass has to be swiftly buried in mud, ash or some other substrate. This can happen relatively easily to small animals, such as the many finely preserved stinkin’ theropods from the Yixian Formation in China, but it’s virtually impossible with a large animal. Except in truly exceptional circumstances, sediments simply don’t get deposited quickly enough to cover a 25 meter, 20 tonne animal before it is broken apart by scavenging, decay and water transport.
Secondly, even when complete sauropods are preserved, or at least complete necks, distortion of the preserved cervical vertebrae is almost inevitable because of their uniquely fragile construction. As in modern birds, the cervical vertebrae were lightened by extensive pneumatisation, so that they were more air than bone, with the air-space proportion typically in the region of 60–70% and sometimes reaching as high as 89%. While this construction enabled the vertebrae to withstand great stresses for a given mass of bone, it nevertheless left them prone to crushing, shearing and torsion when removed from their protective layer of soft tissue. For large cervicals in particular, the chance of the shape surviving through taphonomy, fossilisation and subsequent deformation would be tiny.
So I think we’re basically doomed never to have a really good sauropod neck skeleton.
October 7, 2015
Well, I’m a moron again. In the new preprint that I just published, I briefly discussed the six species of sauropod for which complete necks are known — Camarasaurus lentus (but it’s a juvenile), Apatosaurus louisae (but the last three and maybe C5 are badly damaged), Mamenchisaurus hochuanensis (but all the vertebrae are broken and distorted), Shunosaurus lii, Mamenchisaurus youngi and Spinophorosaurus nigerensis.
I did have the wit to say, in the Author Comment:
Although I am submitting this article for formal peer-review at the same time as publishing it as a preprint, I also solicit comments from readers. In particular I am very keen to know if I have missed any complete sauropod necks that have been described in the literature. In the final version of the manuscript, I will acknowledge those who have offered helpful comments.
Happily, several people have taken me up on this (see the comments on the preprint), but one suggestion in particular was a real D’oh! moment for me. Oliver Demuth reminded me about Kaatedocus — a sauropod that we SV-POW!sketeers love so much that it has its own category on our site and we’ve held it up as an example of how to illustrate a sauropod specimen. More than that: we have included several illustrations of its vertebrae in one of our own papers.
Aaanyway … the purpose of this post is just to get all the beautiful Kaatedocus multiview images up in one convenient place. They were freely available as supplementary information to the paper, but now seem to have vanished from the publisher’s web-site. I kept copies, and now present them in the conveniently viewable JPEG format (rather the download-only TIFF format of the originals) and with each image labelled with its position in the column.
Please note, these images are the work of Tschopp and Mateus (2012) — they’re not mine!
C15 (and the rest of the skeleton) is missing, which makes this a very nearly, but not quite, complete sauropod neck.
- Tschopp, Emanuel, and Octávio Mateus. 2012. The skull and neck of a new flagellicaudatan sauropod from the Morrison Formation and its implication for the evolution and ontogeny of diplodocid dinosaurs. Journal of Systematic Palaeontology 11(7):853-888. doi:10.1080/14772019.2012.746589
September 3, 2015
Here I am at SVPCA in 2015. I am haunted by the fact that ten years ago at SVPCA 2005, I gave a talk about the NHM’s Tendaguru brachiosaurid, NHMUK R5937. And the description is still not done and submitted a full decade later. Even though it’s objectively one of the most beautiful specimens in the world:
So here is my pledge to the world:
By this time next year (i.e. the start of SVPCA 2016 in Liverpool), I will have written and submitted this description. If I fail, I give you all permission — no, I beg you — to mock me mercilessly. Leave mocking comments on this blog, yes; but more than that, those of you at SVPCA are invited to spend the week pointing contemptuously at me and saying “Ha!”
Let’s hope it doesn’t come to that.
Update (6 September): see also.
February 26, 2015
Last October, Mike posted a tutorial on how to choose a paper title, then followed it up by evaluating the titles of his own papers. He invited me to do the same for my papers. I waited a few days to allow myself to forget Mike’s comments on our joint papers – not too hard during my fall anatomy teaching – and then wrote down my thoughts.
And then did nothing with them for three and a half months.
The other day I rediscovered that draft and thought, hey, I don’t remember anything I wrote back then, I should redo the experiment and see if my evaluations will be consistent. And this time without looking at Mike’s post at all, so the risk of contamination would be even lower.
BUT FIRST I thought I should write down what I admire in paper titles, so I could see whether my titles actually lived up to my ideals. So now we can compare:
- what I say I like in paper titles;
- what I actually titled my papers;
- what I had to say about my titles last October;
- what I have to say about them now;
- and, for some of my papers, what Mike had to say about them.
What I Admire In Paper Titles
Brevity. I first became consciously aware of the value of concise titles when I read Knut Schmidt-Nielsen’s autobiography, The Camel’s Nose, in 2004 or 2005. (Short-short review: most of the book is a narrative about scientific questions and it’s great, the self-congratulatory chapters near the end are much less interesting. Totally worth reading, especially since used copies can be had for next to nothing.) Schmidt-Nielsen said he always preferred short, simple titles. Short titles are usually punchy and hard to misunderstand. And I like titles that people can remember, and a short title is easier to recall than a long one.
Impact. In short, maximum information transfer using the minimum number of words. This is a separate point from sheer brevity; a paper can have a short title that doesn’t actually tell you very much. But brevity helps, because it’s difficult to compose a long title that really hits hard. Whatever impact a title might have, it will diluted by every extraneous word.
Full sentences as titles. This is taking the information-transfer aspect of the last admirable quality to its logical extreme, although often at the expense of brevity. I was heavily influenced here by two things that happened while I was at Berkeley. First, I taught for a year in an NSF GK-12 program, where graduate students went out into local elementary, middle, and high schools and taught biology enrichment classes. One thing that was drilled into us during that experience is that we were teaching concepts, which ideally would be expressed as complete sentences. Also about that same time I read James Valentine’s book On the Origin of Phyla. The table of contents of that book is several pages long, because every chapter title, heading, and subheading is a complete sentence. This has a lovely effect: once you’ve read the table of contents of the book or any of its parts, you’ve gotten the TL;DR version of the argument. Sort of like a distributed abstract. I’d like to do that more.
How Did I Do?
Time to see if my actions match my words. Full bibliographic details and PDFs are available on my publications page. I stuck with Mike’s red-blue-green color scheme for the verdicts. My October 2014 and February 2015 thoughts are labeled. For joint papers with Mike, I’ve copied his assessment in as well. Any comments in brackets are my editorializing now, comparing what I said in October to what I said a few days ago before I’d looked back at my old comments or Mike’s.
* * * * * * * * * * * *
Sauroposeidon proteles, a new sauropod from the Early Cretaceous of Oklahoma. (11 words)
Oct 2014: Like it. Short, to the point, includes the taxon name.
Feb 2015: Good, gets the job done with a minimum of fuss
Osteology, paleobiology, and relationships of the sauropod dinosaur Sauroposeidon. (9 words)
Oct 2014: This title was inspired by the papers from the early 20th century
Feb 2015: It gets the job done, I suppose. I can’t help but wonder if there might have been a more elegant solution. Part of my unease is that this title is an example of the same attitude that produced the next monstrosity.
Osteological correlates of cervical musculature in Aves and Sauropoda (Dinosauria: Saurischia), with comments on the cervical ribs of Apatosaurus. (19 words)
Oct 2014: Ugh. It gets the job done, I suppose, but it’s waaaay long and just kind of ugly.
Feb 2015: Ugh. Waaay too wordy. I had a (fortunately brief) fascination with long titles, and especially the phrase, “with comments on”. Now I would cut it down to “Bony correlates of neck muscles in birds and sauropod dinosaurs” (10 words)
Vertebral pneumaticity, air sacs, and the physiology of sauropod dinosaurs. (10 words)
Oct 2014: Like it. Would be better made into a sentence, like, “Vertebral pneumaticity is evidence for air sacs in sauropod dinosaurs.”
Feb 2015: Fairly clean. Does what it says on the tin. I’m having a hard time seeing how it could be turned into a sentence and still convey so much of what the paper is about in so few words.
[Heh. As we will see again later on, I was evidently smarter last fall than I am now.]
The evolution of vertebral pneumaticity in sauropod dinosaurs. (8 words)
Oct 2014: Like it. It couldn’t really be any shorter without losing crucial information. Happy to have a decent title on my second-most-cited paper!
Feb 2015: Short, clean, probably my best title ever.
First occurrence of Brachiosaurus (Dinosauria: Sauropoda) from the Upper Jurassic Morrison Formation of Oklahoma. (14 words)
Oct 2014: Yep. once you’ve read the title, you barely need to read the paper. Even better would have been, “A metacarpal of Brachiosaurus from the Upper Jurassic Morrison Formation of Oklahoma.” (12 words)
Feb 2015: Does what it says, but like my other PaleoBios pub, it’s a long title for a short paper. Now I would title it, “First record of the sauropod dinosaur Brachiosaurus from Oklahoma” (9 words)
[my October title was better!]
Postcranial skeletal pneumaticity in sauropods and its implications for mass estimates. (11 words)
Oct 2014: It’s not elegant but it gets the job done. I wanted that paper to be one-stop shopping for sauropod PSP, but of course the real payoff there is the ASP/mass-estimate stuff, so I’m happy to have punched that up in the title.
Feb 2015: Good enough. I like it. It’s a little long–I could reasonably have just titled this, “Postcranial skeletal pneumaticity in sauropods”, but I wanted to draw attention to the implications for mass estimates.
Sauroposeidon: Oklahoma’s native giant (4 words)
Origin of postcranial skeletal pneumaticity in dinosaurs. (7 words)
Oct 2014: About all I would change now would be to add the word “early” at the beginning of the title.
Feb 2015: Great. Could not be shortened further without losing information.
What pneumaticity tells us about ‘prosauropods’, and vice versa. (9 words)
Oct 2014: Love this title. I used it for the abstract of the SVP talk that the paper was derived from, too.
Feb 2015: Kind of a gimmick title, but it’s accurate–the SVP abstract this paper was based on was built around a bullet list. And it’s still nice and short.
Evidence for bird-like air sacs in saurischian dinosaurs. (9 words)
Oct 2014: Along with Wedel (2003b) and Wedel (2006), this has a short (7-9 words apiece) title that tells you what’s in the paper, simply and directly. For once, I’m glad I didn’t turn it into a sentence. I think a declarative statement like “Saurischian dinosaurs had air sacs like those of birds” would have been less informative and come off as advertising. I wanted this paper to do what the title said: run down the evidence for air sacs in saurischians.
Feb 2015: I like it and wouldn’t change it. The “evidence for” part is key – I didn’t want to write a paper primarily about the air sacs themselves. Instead I wanted to lay out the evidence explaining why we think sauropods had air sacs.
Head and neck posture in sauropod dinosaurs inferred from extant animals. (8 words)
Oct 2014: It’s not horrible but it would be better as a declarative statement like, “Sauropod dinosaurs held their necks and heads elevated like most other tetrapods.” (12 words)
Feb 2015: Good. Reads almost telegraphically brief as it is. Does what it says on the tin.
[October Matt wins again!]
A new sauropod dinosaur from the Lower Cretaceous Cedar Mountain Formation, Utah, USA. (13 words)
Oct 2014: Two things about this one. First, I wish we’d been able to include the taxon name in the title, as we were allowed to do back in the day for Sauroposeidon. Second, I know some people whinge about us using the CMF in the title and in the paper instead of the Burro Canyon Fm, which is what the CMF is technically called east of the Colorado River. But srsly, how many people search for Burro Canyon Fm versus CMF? All of the relevant faunal comparisons are to be made with the CMF, so I don’t feel the least bit bad about this.
Feb 2015: Fine. About as short as it could be and still be informative.
The long necks of sauropods did not evolve primarily through sexual selection. Journal of Zoology. (12 words)
Oct 2014: Perfect. The abstract and the paper expand on the title, but if all you read is the title, you know what we found. That’s a worthy goal.
Feb 2015: My first sentence title. Every word does work, so even though this is one of my longer titles, I like it. The length relative to my other titles is not a knock against this one; rather, it emphasizes how well I did at keeping my early titles short and to the point (with a couple of regrettable exceptions as noted above).
The early evolution of postcranial skeletal pneumaticity in sauropodomorph dinosaurs. (10 words)
Oct 2014: Not bad. I wonder if something like, “Widespread vertebral fossae show that pulmonary pneumaticity evolved early in sauropodomorphs” might be better. It’s hard, though, to put so many long, polysyllabic words in a title that doesn’t sound like a train wreck. At a minimum, this paper does what it says on the tin.
Feb 2015: Short and to the point. Another one that couldn’t be any shorter without losing valuable information.
A monument of inefficiency: the presumed course of the recurrent laryngeal nerve in sauropod dinosaurs. (15 words)
Objectively: BAD to OK
Subjectively: GOOD to FREAKIN’ AWESOME
Oct 2014: I readily admit that I could have fashioned a more informative title, but I dearly love this one. It’s derived from a TV commercial for cheeseburgers (true story), and it warms my heart every time I read it.
Feb 2015: This is definitely a gimmick title that is longer than it has to be (it would be a concise 11 words without the unnecessary intro clause) BUT I love it and I’d do it exactly the same if I could do it again. So there!
Why sauropods had long necks; and why giraffes have short necks. (11 words)
Oct 2014: This is one of those ‘draw the reader in’ titles. I like it.
Feb 2015: We both liked the even shorter, “Why giraffes have short necks” but we really felt that a paper about sauropod necks needed sauropod necks in the title. I feel about this one like I feel about my 2007 prosauropod paper: it’s a gimmick title, but it’s short, so no harm done.
Neural spine bifurcation in sauropod dinosaurs of the Morrison Formation: ontogenetic and phylogenetic implications. (14 words)
Oct 2014: Blah. It’s okay, not great. Maybe better as, “No evidence for increasing neural spine bifurcation through ontogeny in diplodocid sauropods of the Morrison Formation”, or something along those lines.
Feb 2015: This one is long but I think the length is necessary. It’s also kinda boring, but it was addressing a fairly dry point. I think any attempt to shorten it or sexy it up would come off as gratuitous.
The effect of intervertebral cartilage on neutral posture and range of motion in the necks of sauropod dinosaurs. (18 words)
Oct 2014: Probably better along the lines of, “Intervertebral spacing suggests a high neutral posture and broad range of motion in the necks of sauropod dinosaurs” or something like that.
Feb 2015: My second-longest title ever! Looking at it now, I think we could have titled it, “Effects of intervertebral cartilage on neck posture and range of motion in sauropod dinosaurs” and gotten it down to 14 words, but the word ‘neutral’ is doing real work in the original so maybe that’s a bust.
Mike: UGH, rubbish.
[October Matt is up by three points at least]
Caudal pneumaticity and pneumatic hiatuses in the sauropod dinosaurs Giraffatitan and Apatosaurus. (12 words)
Oct 2014: Along the same lines as the previous: “Caudal pneumaticity and pneumatic hiatuses show that pulmonary diverticula in the tails of sauropod dinosaurs were pervasive and complex” or something.
Feb 2015: Good. Long only by comparison with some of my earlier titles. Does what it says.
Mike: NOT GOOD ENOUGH
The neck of Barosaurus was not only longer but also wider than those of Diplodocus and other diplodocines. (18 words)
Feb 2015: My second sentence-as-title, and another entry in the run of mostly long titles from 2012 onward. I like how precise it is, despite the length.
A ceratopsian dinosaur from the Lower Cretaceous of Western North America, and the biogeography of Neoceratopsia. (16 words)
Feb 2015: I had no say in this one (by choice, I’m sure Andy et al. would have listened if I had had any suggestions about the title, but I didn’t). If I could rewrite it, I’d probably make it even longer by adding in the word ‘new’ between A and ceratopsian
Haplocanthosaurus (Saurischia: Sauropoda) from the lower Morrison Formation (Upper Jurassic) near Snowmass, Colorado. (13 words)
Feb 2015: Feels a lot longer than its 13 words, mostly because so many of the words are polysyllabic. Normally I like pulling the words in parentheses out, but in this case I can’t see that doing that would actually improve the title. Sometimes descriptive papers need plain titles. It’s okay.
* * * * * * * * * * * *
First, Mike graded harder than I did. In fact, I only rated one of my titles as BAD, which seems a bit feeble. I think we were using different criteria. If a title was boring but serviceable, I gave it an OK, whereas Mike tended to flag any suboptimal title as RUBBISH. But I didn’t remember that about his post, and I deliberately avoided looking at it until I’d made my evaluations.
Second, except for the two PaleoBios papers, all of the titles from the first half of my career (2000-2007) are 12 words or fewer, including a substantial bundle from before I’d read either The Camel’s Nose or Strunk & White. I’m sure that being a Cifelli student and then a Padian student had something to do with that; Rich and Kevin made me into the word choice and grammar pedant that I am today (my rhetorical excrescences on this site are my fault, not theirs).
Third, much to my surprise and consternation, my titles have gotten longer over time, not shorter. Partly that’s because my little corner of the science ecosystem is getting increasingly subdivided, so it’s hard for me to write a paper now with a title as broad as, “The evolution of vertebral pneumaticity in sauropod dinosaurs.” (Possibly a prod to keep seeking out new, more open horizons?) And I suppose there is some tension between brevity, informativeness, and precision. For example, saying in the title of a descriptive paper than a specimen is “from the Upper Jurassic Morrison Formation of [Location], [State or Country]” adds 11 words, but the title really does need those words. That could be a segue into a whole other discussion about descriptive versus analytical work, but that will be a topic for another time.
Ultimately, this has been a fun exercise and it’s made me more aware of how I title may papers. This is useful because I have some manuscripts in the works that deal with really detailed anatomy, and I need to figure out how to give them titles that are precise and informative but still punchy. It’s not easy.
Parting thought: after I posted the slides from my photography and illustration talk, Mike and I talked about posting some of our figures and dissecting them to see how they could be improved (it’s axiomatic that almost all figures could be improved in one way or another). We should really get started on that.
October 21, 2014
In light of yesterday’s tutorial on choosing titles, here are the titles of all my own published papers (including co-authored ones), in chronological order, with my own sense of whether I’m happy with them now I look back. All the full references are on my publications page (along with the PDFs). I’ll mark the good ones in green, the bad ones in red and the merely OK in blue.
The Phylogenetic Taxonomy of Diplodocoidea (Dinosauria: Sauropoda).
OK, I suppose. It does at least clearly state what the paper is about. I’ll give myself a pass on this since it was my very first paper.
Dinosaur diversity analysed by clade, age, place and year of description.
NOT BAD, since the paper was basically a list of many, many results that could hardly have been summarised in the title. I give myself some points for listing the ways I analysed the data, rather than just saying “An analysis of dinosaur diversity” or something equally uninformative.
Phylogenetic definitions in the pre-PhyloCode era; implications for naming clades under the PhyloCode.
NOT BAD again, I suppose, since it was a discussion paper that couldn’t be summarised in a short title. Could I have said what the alluded-to implications are? I think probably not, in a reasonably concise title.
An unusual new neosauropod dinosaur from the Lower Cretaceous Hastings Beds Group of East Sussex, England.
RUBBISH, since it doesn’t name the new dinosaur (which was of course Xenoposeidon). I was young and stupid back then, and just followed convention. In mitigation, it does at least say when and where the specimen is from.
Case 3472: Cetiosaurus Owen, 1841 (Dinosauria, Sauropoda): proposed conservation of usage by designation of Cetiosaurus oxoniensis Phillips, 1871 as the type species.
DOUBLE-PLUS UGLY. But I am going to blame the journal on this one — they have a very firmly defined format for petition titles.
Head and neck posture in sauropod dinosaurs inferred from extant animals.
RUBBISH. What was I thinking, and why did my SV-POW!sketeer co-authors let me choose such an uninformative title? We should of course have gone with a title that says what posture we inferred. The associated blog-post had a much better title: Sauropods held their necks erect … just like rabbits.
A re-evaluation of Brachiosaurus altithorax Riggs 1903 (Dinosauria, Sauropoda) and its generic separation from Giraffatitan brancai (Janensch 1914).
ADEQUATE, since the title strongly implies the conclusion (generic separation) even if doesn’t quite come out and say it.
Electronic publication of nomenclatural acts is inevitable, and will be accepted by the taxonomic community with or without the endorsement of the Code.
BRILLIANT. The best title in my CV. You hardly even need to read the paper once you’ve read the title. The only downside: it’s 12 characters too long to tweet.
Sharing: public databases combat mistrust and secrecy.
GOOD, but I can’t take the credit for that (A) because I was third author behind Andy Farke and Matt, and (B) because the journal chose the title.
The Open Dinosaur Project.
OK, but we should have done better. Something like “The Open Dinosaur Project recruits volunteer effort to analyse dinosaur evolution”. Or, if we were being honest (and prescient), “The Open Dinosaur Project will lie embarrassingly moribund for more than two years”.
Sauropod dinosaur research: a historical review.
OK, since it does say what the paper is. But this title is not as good as that of the talk it was based on, “The evolution of sauropod dinosaurs from 1841 to 2008”. (I notice that Mark Witton nicked my title for his talk at TetZooCon.)
Running a question-and-answer website for science education: first hand experiences.
UNOBJECTIONABLE, but not my choice anyway — lead author Dave Hone presumably picked it. Could have done better by stating what at least one of those experiences was.
A new sauropod dinosaur from the Lower Cretaceous Cedar Mountain Formation, Utah, USA.
RUBBISH. At least this time it wasn’t entirely my fault. When we submitted this to Acta Palaeontologica Polonica, it was called “Brontomerus mcintoshi, a new sauropod dinosaur from the Lower Cretaceous Cedar Mountain Formation, Utah, USA”, but the journal made us take the taxon name out of the title. Why? Why why WHY?
The long necks of sauropods did not evolve primarily through sexual selection.
Why sauropods had long necks; and why giraffes have short necks.
EXCELLENT. Short, appealing and (hopefully) funny. When I give talks based on this paper, I use the even better short version, just “Why giraffes have short necks”. But that seemed a bit too cute for an academic setting.
Neural spine bifurcation in sauropod dinosaurs of the Morrison Formation: ontogenetic and phylogenetic implications.
WEAK. We should have stated the conclusion: a title like “Neural spine bifurcation in sauropods of the Morrison Formation is not an ontogenetic feature, but is phylogenetically significant” would have been better.
The neck of Barosaurus was not only longer but also wider than those of Diplodocus and other diplodocines.
GOOD. Not particularly exciting, but explicit.
Caudal pneumaticity and pneumatic hiatuses in the sauropod dinosaurs Giraffatitan and Apatosaurus.
NOT GOOD ENOUGH. We should have stated the main finding: “Caudal pneumaticity and pneumatic hiatuses reveal cryptic diverticula in the sauropod dinosaurs Giraffatitan and Apatosaurus“.
The effect of intervertebral cartilage on neutral posture and range of motion in the necks of sauropod dinosaurs.
UGH, rubbish. What the heck was I thinking? I should have written this post a couple of years ago, and used it to make me choose a much better title. As it is, it just leaves the reader assuming intervertebral cartilage probably has some effect, but they have no idea what.
I make that six good titles, seven bad ones and six indifferent. Awarding two points per good title and one per adequate title, I give myself 18 points out of a possible 38 — slightly less than half, at 47%. More worryingly, there’s no apparent trend towards choosing better titles.
Must do better.
May 7, 2014
[NOTE: see the updates at the bottom. In summary, there’s nothing to see here and I was mistaken in posting this in the first place.]
Elsevier’s War On Access was stepped up last year when they started contacting individual universities to prevent them from letting the world read their research. Today I got this message from a librarian at my university:
The irony that this was sent from the Library’s “Open Access Team” is not lost on me. Added bonus irony: this takedown notification pertains to an article about how openness combats mistrust and secrecy. Well. You’d almost think NPG wants mistrust and secrecy, wouldn’t you? It’s sometimes been noted that by talking so much about Elsevier on this blog, we can appear to be giving other barrier-based publishers a free ride. If we give that impression, it’s not deliberate. By initiating this takedown, Nature Publishing Group has self-identified itself as yet another so-called academic publisher that is in fact an enemy of science. So what next? Anyone who wants a PDF of this (completely trivial) letter can still get one very easily from my own web-site, so in that sense no damage has been done. But it does leave me wondering what the point of the Institutional Repository is. In practice it seems to be a single point of weakness allowing “publishers” to do the maximum amount of damage with a single attack.
But part of me thinks the thing to do is take the accepted manuscript and format it myself in the exact same way as Nature did, and post that. Just because I can. Because the bottom line is that typesetting is the only actual service they offered Andy, Matt and me in exchange for our right to show our work to the world, and that is a trivial service.
The other outcome is that this hardens my determination never to send anything to Nature again. Now it’s not like my research program is likely to turn up tabloid-friendly results anyway, so this is a bit of a null resolution. But you never know: if I happen to stumble across sauropod feather impressions in an overlooked Wealden fossil, then that discovery is going straight to PeerJ, PLOS, BMC, F1000 Research, Frontiers or another open-access publisher, just like all my other work.
And that’s sheer self-interest at work there, just as much as it’s a statement. I will not let my best work be hidden from the world. Why would anyone?
Let’s finish with another outing for this meme-ready image.
David Mainwaring (on Twitter) and James Bisset (in the comment below) both pointed out that I’ve not seen an actual takedown request from NPG — just the takedown notification from my own library. I assumed that the library were doing this in response to hassle from NPG
, but of course it’s possible that my own library’s Open Access Team is unilaterally trying to prevent access to the work of its university’s researchers.
I’ve emailed Lyn Duffy to ask for clarification. In the mean time, NPG’s Grace Baynes has tweeted:
So it looks like this may be even more bizarre than I’d realised.
Further bulletins as events warrant.
OK, consensus is that I read this completely wrong. Matt’s comment below says it best:
I have always understood institutional repositories to be repositories for author’s accepted manuscripts, not for publisher’s formatted versions of record. By that understanding, if you upload the latter, you’re breaking the rules, and basically pitting the repository against the publisher.
Which is, at least, not a nice thing to do to the respository.
So the conclusion is: I was wrong, and there’s nothing to see here apart from me being embarrassed. That’s why I’ve struck through much of the text above. (We try not to actually delete things from this blog, to avoid giving a false history.)
My apologies to Lyn Duffy, who was just doing her job.
This just in from Lyn Duffy, confirming that, as David and James guessed, NPG did not send a takedown notice:
This PDF was removed as part of the standard validation work of the Open Access team and was not prompted by communication from Nature Publishing. We validate every full-text document that is uploaded to Pure to make sure that the publisher permits posting of that version in an institutional repository. Only after validation are full-text documents made publicly available.
In this case we were following the regulations as stated in the Nature Publishing policy about confidentiality and pre-publicity. The policy says, ‘The published version — copyedited and in Nature journal format — may not be posted on any website or preprint server’ (http://www.nature.com/authors/policies/confidentiality.html). In the information for authors about ‘Other material published in Nature’ it says, ‘All articles for all sections of Nature are considered according to our usual conditions of publication’ (http://www.nature.com/nature/authors/gta/others.html#correspondence). We took this to mean that material such as correspondence have the same posting restrictions as other material published by Nature Publishing.
If we have made the wrong decision in this case and you do have permission from Nature Publishing to make the PDF of your correspondence publicly available via an institutional repository, we can upload the PDF to the record.
Open Access Team
Here’s the text of the original notification email so search-engines can pick it up. (If you read the screen-grab above, you can ignore this.)
University of Bristol — Pure
Lyn Duffy has added a comment
Sharing: public databases combat mistrust and secrecy
Farke, A. A., Taylor, M. P. & Wedel, M. J. 22 Oct 2009 In : Nature. 461, 7267, p. 1053
Research output: Contribution to journal › Article
Lyn Duffy has added a comment 7/05/14 10:23
Dear Michael, Apologies for the delay in checking your record. It appears that the document you have uploaded alongside this record is the publishers own version/PDF and making this version openly accessible in Pure is prohibited by the publisher, as a result the document has been removed from the record. In this particular instance the publisher would allow you to make accessible the postprint version of the paper, i.e., the article in the form accepted for publication in the journal following the process of peer review. Please upload an acceptable version of the paper if you have one. If you have any questions about this please get back to us, or send an email directly to firstname.lastname@example.org Kind regards, Lyn Duffy Library Open Access Team.
February 6, 2014
In a recent comment, Doug wrote:
If I want to be a truly educated observer of Tyrannosaurus rex mounts, what 5 things should I look for in a reconstruction to assess if it is true to our current scientific understanding? I’m not talking tail dragging/upright at this point…we are well past that I hope.
If he had asked about Apatosaurus, I could have written him a novel. But it is a point of pride with me not to contribute to the over-application of human attention to T. rex; not only would it be vulgar, it would also be a waste of resources, considering how many people already have that covered. So, you theropod workers and avocational “rexperts”, we’re finally inviting you to the high table. Please, tell us–and Doug–what separates the good T. rex mounts from the crappy ones. Big piles of SV-POW! bucks will be showered on whoever brings the most enlightenment, especially if you adhere to the requested List of 5 Things format.
The comment lines are open–go!